dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00585
Location and strand information: 102407 - 103573 (+)
Family: 3.A.1.12.4
Protein type: TC
Protein description: Carnitine transport ATP-binding protein OpuCA

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00586
Location and strand information: 103576 - 104211 (+)
Family: 3.A.1.12.4
Protein type: TC
Protein description: Carnitine transport permease protein OpuCB

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00587
Location and strand information: 104212 - 105132 (+)
Family: 3.A.1.12.4
Protein type: TC
Protein description: Carnitine transport binding protein OpuCC

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00588
Location and strand information: 105137 - 105799 (+)
Family: 3.A.1.12.4
Protein type: TC
Protein description: Carnitine transport permease protein OpuCD

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00589
Location and strand information: 106127 - 107344 (-)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 5.0596
Protein molecular weight: 46082.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00590
Location and strand information: 107552 - 107812 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00591
Location and strand information: 107817 - 109262 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.5055
Protein molecular weight: 54687.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00592
Location and strand information: 109273 - 110895 (-)
Family: GH43|CBM13|GH43_4
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 4.3292
Protein molecular weight: 61056.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00593
Location and strand information: 110910 - 111866 (-)
Family: GH43|GH43_26|CBM42
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.7302
Protein molecular weight: 36645.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00594
Location and strand information: 111882 - 112298 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00595
Location and strand information: 112307 - 113158 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00596
Location and strand information: 113171 - 114052 (-)
Family: 3.A.1.1.23
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00597
Location and strand information: 114106 - 115356 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00598
Location and strand information: 115674 - 116564 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00599
Location and strand information: 116703 - 118526 (-)
Family: 2.A.3.14.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000106_2|CGC1
Gene ID: MGYG000000106_00600
Location and strand information: 118748 - 121453 (-)
Family: 9.B.74.1.1
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000106_00589	GH43_e123\|3.2.1.99	arabinan
MGYG000000106_00591	GH51_e14\|3.2.1.55	arabinan
MGYG000000106_00592	GH43_e54\|CBM13_e83\|3.2.1.99	arabinan
MGYG000000106_00593	GH43_e158\|CBM42_e11\|3.2.1.55\|3.2.1.-	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000106_00585	Carnitine transport ATP-binding protein OpuCA	TC	102407	103573	+	3.A.1.12.4
MGYG000000106_00586	Carnitine transport permease protein OpuCB	TC	103576	104211	+	3.A.1.12.4
MGYG000000106_00587	Carnitine transport binding protein OpuCC	TC	104212	105132	+	3.A.1.12.4
MGYG000000106_00588	Carnitine transport permease protein OpuCD	TC	105137	105799	+	3.A.1.12.4
MGYG000000106_00589	Extracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	106127	107344	-	GH43\| GH43_4
MGYG000000106_00590	hypothetical protein	null	107552	107812	-	DUF6171
MGYG000000106_00591	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	107817	109262	-	GH51
MGYG000000106_00592	Extracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	109273	110895	-	GH43\| CBM13\| GH43_4
MGYG000000106_00593	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	110910	111866	-	GH43\| GH43_26\| CBM42
MGYG000000106_00594	hypothetical protein	null	111882	112298	-	No domain
MGYG000000106_00595	L-arabinose transport system permease protein AraQ	TC	112307	113158	-	3.A.1.1.20
MGYG000000106_00596	hypothetical protein	TC	113171	114052	-	3.A.1.1.23
MGYG000000106_00597	hypothetical protein	STP	114106	115356	-	SBP_bac_1
MGYG000000106_00598	hypothetical protein	TF	115674	116564	+	HTH_5
MGYG000000106_00599	hypothetical protein	TC	116703	118526	-	2.A.3.14.3
MGYG000000106_00600	hypothetical protein	TC	118748	121453	-	9.B.74.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature